Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951264.1_cds_XP_016491354.1_81678
CDS Infomation

[gene=LOC107811026] [db_xref=GeneID:107811026] [protein=transcription factor TFIIIB component B''-like isoform X4] [protein_id=XP_016491354.1] [location=complement(join(6762..6908,9142..9275,10634..10778,12573..12759,15525..15568,15683..15783,15860..16247,16368..16708,16788..16845,16945..17147,17313..17376,17452..17609,17880..18044,18132..18177))] [gbkey=CDS]
Sequence

ATGGACCTTTTAGATGATATTTTGGCTGATGGTGCTTCAAAGACAGTCAAGGCTGGTGGC
AAGTTTCAACCCAAGGCAAAGCCTCGTCCGGTGAAAAAAGGTCCAGCTGTTGCATCCTCA
ACAGTTTCTTTGACGTCAAAACCCACTGGTGATACAGTAGCAACTGATTCTTTTGAGGCT
CTTAAGAAGGATGGAAAGAATTCCCAAAATTACTATGAACAAAGCTCTGTGTTAGCGGAA
CCTTCCTTGGAGCATCCTCTTGCTGCAGAAACTTTGTGTCCATCAGTTGGTTCATATCTA
GATACAAGTACGGTAGTGCCTGATAACAGTGAAGATTCGAAAACTTGTCTTGAGAAATCC
GAGGGAGAGTATGCAGACATATATATAGGTTTGGATTCGTTTGATGATTTACTTCCTACC
TCAAGCGCCATAGAAAATTCTAGTCCCGCTACAGATCCATCTGCTGTTCATGTTGATGGT
GCAGAGAAGGGACAAGATCAACTTTCAATTCCAGTTTCTTCAGTTGATGATTCAGCTCCT
AGTACTTCTAATCTTCAACCTGATGAAGTGGCAGGATGCCAAGATCCATTAACTTGTCAA
GGAAGTGTTGTTCCTGTTAGTGGAAGTTGTCAGATGGAGATGGACAGCTATCCTTCCTTG
GAAGCAGATATCCTGGGGGTAACTACTACATCTGGGCAGAGTACCAGGAGGTTTCAACCC
AAGTCCAAGCTACAAGTATACAGAGAGAGATACGACACAAGCATCCCTGATTCAGATGCA
GTAGAGTCAGTTTCATGTCAGCCAAATTCACACTCCGTTCATTCTGAAATGGATTTTGTG
GATAGAGGGAAGGAACATGGATTTCCTGCTGATGATGTCCTTGATTTCTCAGCCAGAGGA
TTTGATAATAATATCATTACAGAATCTACTCATGAATTTCCAGTTCATGAAGAATATGTT
ATCGAAGCTTCGCATTCAGATGTTCGCATCCCAGCAGAACTCCATGAATCTACTTCTCAG
ATGCCTGAGGAACCTGTACATCAGAGGCCAAAGACTAAAAAGCAAAAATTGCCTGCATCT
GATCTTTCTGCAATTACTGAAGAGAATGGAGCGGGTAGATCATTAAGGAGTAGAAGAAAG
TCCGTAAATGCAAATAGACTAGTAGATGAGTCTGAAGTAGTAGCGGATGATGGGGAATAT
GTGCCTGAACAACCTAATGATTCTGTTACAAATGGTAATAATGAGGATCTTCTGGTGGAA
AATGAATCACAAGGGAAAAAAGTACAGAAAAAGTCAAAGAGAACAGTTGCTGAGGATGGG
AAGCAAGTTAGGAAGAGTAAAAAGACCACTGAAGCTTCAGACCAGGCAGCAAACAAGAAA
CCTAAGAAGTTTTCTCACTCCACTCGTCAAAAGAGGAGACAAGTGAACAAGGCTTTGCTT
GAGGCTCCCGAGTATGAGATTGACTACCAAAAGGTACCTATTAAGGATCTAATTATATTA
GGAGAGCACAGAGAACGGCTGGCGAAAAAAGATGCTGCAGCGTCACAAATACCTACTACA
GATCAGAGCACTGGTGCTTCTGTTTCTAATTATAATGAGGATGAGACCTATCCTTCAGAT
GACGGCGCAGAAGATAATGATCACCAAATAGGTTCTCGGGCTCAAGATTCTTCTGCCTAC
TTCAATTATCAAACTTATATGGACAAAACGCCCAGCACAAGGTGGTCAAAACAGGAAACA
GAACTGTTCTATGAGGCTGTGCAGCAGTTTGGGACTGACTTATCCCTGATACAACAACTT
TTTCCTGGCCGAACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAACAT
CCATTTAGGCTTCATGATGCTCTAACCAATCGTTCCAAAGATCATTCCCACTTTGAACGA
GTAATTGAGCGTTTAAAACAAATTGAAGCCGAGGAATTGCAGAAAGCCGATAAAGATGAG
TCAATTGACTTGACAGGGGAGCAGGAAGTGGAGGAGGGAACTCAGGAGATCAATGAGGAA
GAAGCGAACTCTGAAAATGTTGAGAAAAAAGAAGTTGAAGCTGTGGAGCAACAAGATGTT
CCAGAAATGGAGAGTCCAATTGAGGACTATGATAGTGAAGATGATTCTTGGAGATGGAGT
CAGTATAAGAGTGAAGTGTGA

Peptide Sequence

PEP ID

XP_016491354.1
PEP Infomation

PREDICTED: transcription factor TFIIIB component B''-like isoform X4 [Nicotiana tabacum]
Sequence

MDLLDDILADGASKTVKAGGKFQPKAKPRPVKKGPAVASSTVSLTSKPTGDTVATDSFEA
LKKDGKNSQNYYEQSSVLAEPSLEHPLAAETLCPSVGSYLDTSTVVPDNSEDSKTCLEKS
EGEYADIYIGLDSFDDLLPTSSAIENSSPATDPSAVHVDGAEKGQDQLSIPVSSVDDSAP
STSNLQPDEVAGCQDPLTCQGSVVPVSGSCQMEMDSYPSLEADILGVTTTSGQSTRRFQP
KSKLQVYRERYDTSIPDSDAVESVSCQPNSHSVHSEMDFVDRGKEHGFPADDVLDFSARG
FDNNIITESTHEFPVHEEYVIEASHSDVRIPAELHESTSQMPEEPVHQRPKTKKQKLPAS
DLSAITEENGAGRSLRSRRKSVNANRLVDESEVVADDGEYVPEQPNDSVTNGNNEDLLVE
NESQGKKVQKKSKRTVAEDGKQVRKSKKTTEASDQAANKKPKKFSHSTRQKRRQVNKALL
EAPEYEIDYQKVPIKDLIILGEHRERLAKKDAAASQIPTTDQSTGASVSNYNEDETYPSD
DGAEDNDHQIGSRAQDSSAYFNYQTYMDKTPSTRWSKQETELFYEAVQQFGTDLSLIQQL
FPGRTRRQLKLKYKKEERQHPFRLHDALTNRSKDHSHFERVIERLKQIEAEELQKADKDE
SIDLTGEQEVEEGTQEINEEEANSENVEKKEVEAVEQQDVPEMESPIEDYDSEDDSWRWS
QYKSEV

Transcript Sequence

Gene sequence data has not been registered.